PepCyber logo
PPBD Classes -PPBD Proteins -Interaction Search - Tutorial - Glossary - Disclaimer - PepArray - PepCyber.org
About PepCyber:P~Pep
 
  • PepCyber :P~Pep is the largest public database of human protein-protein interactions mediated by phosphoprotein binding domains (PPBDs).
  • Current release: v. 1.2 (May 2010), includes 11,269 records of interactions between 387 PPBD proteins and 1,471 substrate proteins, curated from 4,852 published studies.
  • Please direct questions and comments to help@pepcyber.org.
  •  
    References
     
  • Gong, W., Zhou, D., Ren, Y., Wang, Y., Zuo, Z., Shen, Y., Xiao, F., Zhu, Q., Hong, A., Zhou, X., Gao, X and Li, T. (2008) PepCyber:P~PEP: a database of human protein protein interactions mediated by phosphoprotein-binding domains. Nucleic Acids Res , 36 , D679-683. [PubMed] [Full text]
  • Wan, J., Kang, S., Tang, C., Yan, J., Ren, Y., Liu, J., Gao, X., Banerjee, A., Ellis, L.B. and Li, T. (2008) Meta-prediction of phosphorylation sites with weighted voting and restricted grid search parameter selection. Nucleic Acids Res . [PubMed] [Full text]
  •  
    Related databases
     
  • BOND (formerly BIND), by Unleashed Informatics.
  • DIP, developed at the University of California Los Angeles.
  • DOMINO, developed at the University of Rome Tor Vergata, Italy.
  • ELM, by Eukaryotic Linear Motif (ELM) consortium.
  • HPRD , developed at Institute of Bioinformatics, Bangalore, India and Johns Hopkins University.
  • Phospho.ELM, by Eukaryotic Linear Motif (ELM) consortium.
  • Scansite, developed at Massachusetts Institute of Technology.
  • STRING, by European Molecular Biology Laboratory (EMBL) and University of Zürich (UniZH)
  •  
     
    Disclaimer

    THIS SITE AND RELATED SERVICES ARE PROVIDED SUBJECT TO THESE TERMS AND CONDITIONS. PLEASE READ THE FOLLOWING INFORMATION CAREFULLY. YOUR CONTINUED USE OF THIS SITE WILL INDICATE YOUR AGREEMENT TO BE BOUND BY THE TERMS AND CONDITIONS SET FORTH BELOW. IF YOU DO NOT AGREE TO THESE TERMS AND CONDITIONS, PLEASE EXIT THIS SITE.

    Purpose

    This World Wide Web Site is a collection of databases relating to proteins and nucleic acids and their interactions.  The purpose is to provide access to and information about the databases to the public.

    Copyright

    All information available from this site is within the public domain.  All rights, including copyright, in the content of the web pages contained in this website are owned or controlled for these purposes by LC Sciences and Biolead.org.  In accessing the web pages, you agree that you may only download the content for your own personal non-commercial use.   In addition, it is requested that in any subsequent use of this work, the appropriate acknowledgment be given.  For special need-related downloading and the use of this web site for commercial purposes should contact pepcyber@biolead.org. The maximum download permitted per day is 100 entries.

    You are not permitted to copy, broadcast, download, store (in any medium), transmit, show or play in public, adapt or change in any way the content of these web pages for any other purpose whatsoever without the prior written permission of LC Sciences and Biolead.org. 

    Security

    Unauthorized attempts to upload information or change information on this website are strictly prohibited and may be punishable under the Computer Fraud and Abuse Act of 1986 and the National Information Infrastructure Protection Act.   For site security purposes and to ensure that this service remains available to all users, this server employs software programs to monitor network traffic to identify unauthorized attempts to upload or change information, or otherwise cause damage.

    Privacy

    Except to maintain required correspondence files, no other attempts are made to identify individual users or their usage habits. Raw data logs are used to simply determine how many users are accessing the site, which pages are the most popular, and, from time to time, from which top level domain users are coming.

    We will not obtain personally identifying information about you when you visit our site unless you choose to provide such information to us. If you choose to send email to any points of contact on the site any contact information that you provide will be solely used to respond to your request and not stored.

    Disclaimer

    USE IS AT YOUR OWN RISK AND SUBJECT TO THE FOLLOWING: The authorized use of the information on this website is limited to informational and educational purposes only, and NOT for operational or commercial purposes.

    THE MATERIALS PROVIDED AT THIS SITE ARE PROVIDED "AS IS" WITHOUT ANY WARRANTIES OF ANY KIND INCLUDING WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, OR NON-INFRINGEMENT OF INTELLECTUAL PROPERTY.

    LC Sciences and Biolead.org have made a reasonable effort to ensure that the attached data/records are up-to-date, accurate, complete, and comprehensive at the time of disclosure; however, LC Sciences and Biolead.org do not warrant the accuracy and completeness of the materials at this website.  The materials at this website may be out of date, and LC Sciences and Biolead.org make no commitment to update the materials at this website.  LC Sciences and Biolead.org may change the materials at this website, at any time without notice.

    Limitation of Liability - The accuracy or reliability of the information on this website is not guaranteed or warranted in any way and LC Sciences and Biolead.org , their Agencies and Representatives disclaim liability of any kind whatsoever, including, without limitation, liability for quality, performance, merchantability and fitness for a particular purpose arising out of the use, or inability to use the information.

    External Links - Some web pages may provide links to other Internet sites for the convenience of users.  LC Sciences or Biolead.org is not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee the products, services, or information described or offered at these other Internet sites.  Users cannot assume that the external sites will abide by the same Privacy Policy described above.  It is the responsibility of the user to examine the copyright and licensing restrictions of linked pages and to secure all necessary permissions.

    Pop-Up Advertisements - When visiting our web site, your web browser may produce pop-up advertisements.  These advertisements were most likely produced by other web sites you visited or by third party software installed on your computer.  LC Sciences or Biolead.org does not endorse or recommend products or services for which you may view a pop-up advertisement on your computer screen while visiting our site.

    © 2006-2010 PepCyber.org. All rights reserved. Contact information: help@pepcyber.org